Location
Speakers
Program
Time |
Title |
Location |
|---|---|---|
|
09:00-09:15am |
Welcome from the organizers, announcements |
Foege Auditorium |
|
09:15-10:20am |
Talk Session 1 |
Foege Auditorium |
|
09:15-09:20am |
Introduction by Jonathan T.C. Liu, University of Washington |
Foege Auditorium |
|
09:20-09:50am |
Adam Glaser, Allen Institute. "How to see the big and the small: imaging centimeter scale tissues with nanoscale resolution" |
Foege Auditorium |
|
09:50-10:20am |
Kevin Bishop, University of Washington. "Open-top light-sheet microscopy instrumentation for 3D pathology" |
Foege Auditorium |
|
10:20-10:50am |
Sam A. Golden, University of Washington. "A nuclear-localizing genetic tag strategy optimized for single-cell image segmentation and behavior compatibility" |
Foege Auditorium |
|
10:50-11:15am |
Coffee Break |
Foege Atrium |
|
11:15-12:20pm |
Talk Session 2 |
Foege Auditorium |
|
11:15-11:20am |
Introduction by Joshua C. Vaughan, University of Washington |
Foege Auditorium |
|
11:20-11:50am |
Eva K. Nichols, University of Washington. "Section-free, antibody-free cell type detection" |
Foege Auditorium |
|
11:50-12:20pm |
Chetan Poudel, University of Washington. "Studying the whole mouse kidney: lightsheet microscopy and deep-learning approaches" |
Foege Auditorium |
|
12:20-01:25pm |
Lunch |
Vista Café |
|
01:25-03:00pm |
Talk Session 3 |
Foege Auditorium |
|
01:25-01:30pm |
Introduction by A. Murat Maga, University of Washington & Seattle Children's |
Foege Auditorium |
|
01:30-02:00pm |
Robert Serafin, University of Washington. "Computational methods for non-destructive 3D pathology" |
Foege Auditorium |
|
02:00-02:30pm |
Sharmishtaa Seshamani, Allen Institute. "Cloud Pipelines for Large Scale Light Sheet Image Processing" |
Foege Auditorium |
|
02:30-03:00pm |
Shachi Mittal, University of Washington. "Optical and Molecular Profiling of Diseases using Imaging and Artificial Intelligence" |
Foege Auditorium |
|
03:00-03:20pm |
Coffee Break |
Foege Atrium |
|
03:20-04:30pm |
Talk Session 4 |
Foege Auditorium |
|
03:20-03:25pm |
Introduction by Garret Stuber, University of Washington |
Foege Auditorium |
|
03:25-03:55pm |
Xiaoyin Chen, Allen Institute. "Whole-cortex in situ sequencing reveals peripheral input-dependent cell type-defined area identity" |
Foege Auditorium |
|
03:55-04:25pm |
Kelly Stevens, University of Washington. Title TBD |
Foege Auditorium |
|
04:25-04:30pm |
Closing remarks from the organizers |
Foege Auditorium |
|
04:30-06:30pm |
Poster session with refreshments |
Vista Café |
Overview
Featured Topics
- Light sheet and confocal microscopy
- Volumetric imaging
- Spatial transcriptomics
- 3D pathology
- Optical probes
- Labeling biomolecules in tissues
- Machine learning and image analysis
Speakers
- Kevin Bishop (Ph.D. student, Liu Lab, UW Mechanical Engineering)
- Xiaoyin Chen (Assistant Investigator, Allen Institute for Brain Science)
- Adam Glaser (Senior Scientist, Allen Institute for Neural Dynamics)
- Sam A. Golden (Assistant Professor of Biological Structure, UW)
- Shachi Mittal (Assistant Professor of Chemical Engineering, UW)
- Eva K. Nichols (Postdoc, Beliveau & Shendure Labs, UW Genome Sciences)
- Chetan Poudel (Postdoc, Vaughan Lab, UW Chemistry)
- Robert Serafin (Ph.D. student, Liu Lab, UW Mechanical Engineering)
- Sharmishtaa Seshamani (Computer Vision Manager, Allen Institute for Brain Science)
- Kelly Stevens (Assistant Professor of Bioengineering, UW)
Organizing Committee
- Brian J. Beliveau (UW Genome Sciences)
- Jonathan T.C. Liu (UW Mechanical Engineering)
- Joshua C. Vaughan (UW Chemistry)
Sponsors
